Dr
Karolina Farrell

Dr Karolina FarrellDr Karolina FarrellDr Karolina Farrell

Dr
Karolina Farrell

Dr Karolina FarrellDr Karolina FarrellDr Karolina Farrell
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CURRICULUM VITAE

Summary

I am currently a research fellow at University College London researching the neural basis of schizophrenia and epilepsy and testing the efficacy of a novel gene therapy. I was previously a postdoctoral fellow researching the neural circuits underlying hallucinations and ketamine-induced psychosis at the Francis Crick Institute in London. I completed my PhD in Neuroscience and Mental Health at University College London. In my career so far, I have developed an advanced skill set in the fields of experimental systems neuroscience and computational modelling. Research has given me the opportunity to challenge myself and learn how to ask questions, solve problems, think on my feet, and communicate my findings to outside audiences. Most importantly, I've loved working with diverse teams while also maintaining independence through my own work.


Mental health remains one of the least understood aspects of who we are and how we understand the world around us. I'm interested in leading and supporting neuroscientific research that aims to understand and develop better therapies for psychiatric symptoms, which occur in mental health disorders as well as in prodromal phases or in combination with other conditions such as in neurodegenerative, neurological, immune, or metabolic disorders.

Research Interests

Our brains are responsible for our understanding of and interaction with the world around us. I am interested in how populations of neurons act in circuits to create our perception and behaviour in order to respond to the external world.


In neuroscience, we aim to understand how the brain works. Part of understanding how the brain works is understanding what happens when it doesn't work optimally. For example, brain trauma, neurodevelopmental disorders, and neurodegenerative disease can tell us a lot about what is necessary for a brain to function well. The final frontier is mental disorders: these are defined by behavioural symptoms because we don't yet understand the neural circuits involved. By researching how neural circuits enact computations and behaviour, we can begin to unpick the mechanisms that make our brains work, and what makes us think the way that we think. This understanding is what will allow us to develop life-changing therapies for people with mental health disorders.


In my current role, I am researching the aberrant neuronal activity in schizophrenia and epilepsy, as well as testing the efficacy of a novel gene therapy in correcting this activity. I use dual-colour Miniscope imaging and Neuropixels recording to measure neuronal activity during behaviour. I work in collaboration with neuroscientists that specialise in electrophysiology and gene therapy to treat epilepsy.


In my postdoctoral fellowship, I investigated the neural mechanisms of hallucinations in psychosis. To do this, I used a range of systems neuroscience techniques, including behavioural analysis, dual-colour neuronal imaging, optogenetics, electrophysiology, pharmacology, and computational modelling to examine how hallucinations occur in mice and in humans. My work formed part of a team effort to understand and develop better treatments for auditory hallucinations in psychosis, in collaboration with immunologists and clinical psychiatrists investigating how autoimmune disorder may interface with the brain to produce psychotic symptoms.


In my PhD project, I investigated the role of the dopaminergic neurons of the ventral tegmental area (VTA) during goal-directed navigation. To do this, I used calcium imaging and a Miniscope to record neural activity in the VTA in mice as they perform a navigation task in virtual reality. I found two patterns of activity: phasic and ramping. Ramping activity is a relatively novel finding and therefore is not explained by current reinforcement learning theories. I designed a Q-learning model incorporating position inference which explains both types of activity as a by-product of weighting action values by sensory and positional representations. I concluded that VTA dopaminergic neurons convey reward prediction error in both their patterns of activity, which improve the performance of goal-directed navigation (Farrell et al., 2022).

Education & Employment

Research Fellow, University College London (UCL)

Oct 2024 – present

Research fellow investigating the neural basis of schizophrenia and epilepsy and testing novel gene therapies in the lab of Professor Gabriele Lignani.

Postdoctoral Fellow, The Francis Crick Institute

Feb 2022 – Sep 2024

Postdoctoral fellow studying the neural basis of hallucinations and ketamine-induced psychosis in mice and humans in the lab of Dr Katharina Schmack.

PhD in Neuroscience and Mental Health, University College London (UCL)

Oct 2017 – Dec 2021

PhD student on the MRC UCL-Birkbeck Doctoral Training Programme. Thesis investigated the role of VTA dopamine neurons in goal-directed navigation (Farrell et al., 2022).


Awarded Sully Scholarship and UCL Neuroscience Early Career Runner-Up Prize, Junior Category.


Attended the Okinawa Computational Neuroscience Course, with a project focused on temporal difference reinforcement learning modelling.


PhD Supervisors: Professor Aman Saleem (UCL) and Professor Armin Lak (University of Oxford).

Research Technician, Sainsbury Wellcome Centre, UCL

Sep 2016 – Sep 2017

Research technician in the lab of Dr Yoh Isogai. Work included E.coli cell culture for large-scale protein production, building a MERFISH microscope, analysis of mouse pup-directed attack behaviours (Isogai et al., 2018), protocol curation, lab management and procurement, and molecular biology protocols including RT-PCR, gel electrophoresis, Western blot, Southern blot, transformation, competent cell culture, high-pressure liquid chromatography.

Neuroscience MSci, UCL

Sep 2012 – Jul 2016

Awarded 1st class integrated Master’s degree, with undergraduate studies including systems neuroscience, psychopharmacology and neural computation.


Also undertook lab internships in the labs of Professor Andrew MacAskill, Professor Clare Stanford, and Professor Michael Häusser to learn neuronal reconstruction from EM, behavioural assays in mice and immunohistochemistry.


MSci Supervisors: Professor Peter Dayan and Professor Jon Roiser, investigating valence effects on learned helplessness.

A-Levels, The Godolphin & Latymer School

Sep 2005 – Jul 2012

Awarded A*A*A in Maths, Biology and Chemistry.

Awarded Dean Prize and Ennis Biology Prize. 


Awards & Funding

ARIA Precision Neurotechnologies

Jan 2025

Co-wrote funded grant application for 'Minimally invasive self-regulating gene therapy for neuropsychiatric disorders', aiming to develop novel targeted gene therapy for schizophrenia, epilepsy, and dementia. Collaboration of 5 labs over 4 years, total award >£9 million.

UCL Neuroscience Early Career Runner-Up Prize, Junior Category, £250

Jun 2023

Awarded UCL Neuroscience Early Career Runner-Up Prize, Junior Category, with certificate presentation at the UCL Neuroscience Symposium 2023.

Cosyne Presenters travel grant for Cosyne 2022, $1000

Mar 2022

Received travel grant to attend and present poster entitled 'VTA dopamine neurons signal phasic and ramping reward prediction error in goal-directed navigation' at the Cosyne (computational and systems neuroscience) 2022 conference.

FENS Travel grant for SfN 2021, $385

Nov 2021

Received travel grant to attend and present poster entitled 'Midbrain dopamine neurons provide teaching signals for goal-directed navigation' at the Neuroscience 2021 conference hosted by the Society for Neuroscience.

Max Perutz Science Writing Award, £250

Aug 2021

Shortlisted for the MRC Max Perutz Science Writing Award 2021 for article 'Toward reward: how dopamine calls us to action'. Awarded £250, a book, and writing masterclass.

Sully Scholarship upgrade prize, £700

Feb 2020

Awarded the Sully Scholarship for the best departmental upgrade.

Okinawa Computational Neuroscience Course 2019, £1,500+

Jun 2019 – Jul 2019

Accepted onto Okinawa Computational Neuroscience Course 2019 at Okinawa Institute of Science and Technology, all expenses covered.

MRC Doctoral Training Programme, ~£93,000

Oct 2017 – Dec 2021

Accepted onto fully-funded 4-year doctoral programme, including research and conference expenses, funded by the Medical Research Council (UKRI).


Presentations & Talks

Poster presentation at SfN 2024

Oct 2024

Presentation of poster 'Excitatory-inhibitory dynamics during hallucination-like perception'.

Poster presentation at UCL Neuroscience Symposium 2024

June 2024

Presentation of poster 'Excitatory-inhibitory dynamics during hallucination-like perception'.

Poster presentation at SfN 2022

Nov 2022

Presentation of poster 'VTA dopamine neurons signal phasic and ramping reward prediction error in goal-directed navigation'.

Poster presentation at UCL Neuroscience Symposium 2022

June 2022

Presentation of poster 'VTA dopamine neurons signal phasic and ramping reward prediction error in goal-directed navigation', shortlisted for poster award in post-PhD category.

Poster presentation at Cosyne 2022

March 2022

Presentation of poster 'VTA dopamine neurons signal phasic and ramping reward prediction error in goal-directed navigation'.

Invited speaker for Technician Experience

Dec 2021

Invited to present about career and experience as a research technician to MSc students at UCL. 

Poster presentation at SfN 2021

Nov 2021

Presentation of poster 'Midbrain dopamine neurons provide teaching signals for goal-directed navigation'.

Invited speaker for UCL Enrichment Series

Nov 2020 – Dec 2020

Invited to present about career and experience within neuroscience at UCL to undergraduate students.

Poster presentation at FENS 2020

July 2020

Presentation of poster 'Goal-directed navigation drives phasic and prolonged ramping activity in dopaminergic neurons'.

Invited speaker for PhD applications

Oct 2017 – present

Invited speaker for PhD applications tutorial for undergraduate MSci Neuroscience students, UCL.


Invited panel member for PhD applications workshop for postgraduate MSc Psychology students, UCL.

Invited speaker at UCL Centre for Behavioural Change workshop

August 2019

Invited to speak about the PhD student-supervisor relationship and to inform UCL's sexual misconduct strategy.

Poster presentation at Okinawa Computational Neuroscience Course 2019

June 2019

Presentation of poster 'VTA dopaminergic neurons in goal-directed navigation' at the Okinawa Institute for Science and Technology.


Courses & Workshops

UCL Neuropixels Workshop

October 2021 + October 2024

Three day course involving lectures and tutorials on the use of Neuropixels and subsequent data analysis.

Allen Institute Neuropixels Workshop

September 2021

Two day course involving lectures and tutorials on the use of Neuropixels and subsequent data analysis.

OIST Computational Neuroscience Course

June - July 2019

Three week course at the Okinawa Institute of Science and Technology, involving lectures, coding workshops, and self-taught implementation of a reinforcement learning model.


Leadership & Advocacy

Committee member for Career Development Action Group, UCL

Nov 2024 – present

Voluntary position on the Equity, Diversity, and Inclusion Committee at the Institute of Neurology at UCL, supporting the career development of early career and underrepresented researchers.  

Equality, Diversity, and Inclusion Champion, MRC DTP, UCL

Nov 2020 – Dec 2021

Voluntary position within the MRC Doctoral Training Programme at UCL, including sitting on an inter-university PhD programme EDI committee, organising EDI events and outreach, and taking part in admissions and recruitment.  

Equality, Diversity and Inclusion Committee Member

Oct 2020 – Dec 2021

Voluntary position at the Institute of Behavioural Neuroscience, UCL, involving organising EDI meetings and producing IBN EDI strategy.  

MRC Doctoral Training Programme Student Representative, UCL

June 2020 – Dec 2021

Representing the UCL-Birkbeck MRC DTP among UK-wide MRC-funded DTPs.

Women’s Network Postgraduate Research Representative, UCL

Oct 2019 – Sep 2020

Representing postgraduate research students on the Women's Network committee, UCL.

UCL Faculty of Brain Sciences Postgraduate Research Representative, UCLU

Oct 2018 – Oct 2019

Elected to position by faculty vote, sat on UCL's research degrees' committee and faculty research degrees' committee.

Workshop leader for Active Bystander training, UCLU

Sep 2018 – Oct 2018

Led workshops training undergraduates and postgraduates on recognising consent and active bystander techniques as part of UCL's Zero Tolerance to Sexual Harassment campaign.

Blog-style science writer, HelloBio

Sep 2018 – Jan 2019

Invited to write blog-style articles about life as a scientist, including navigating the student-supervisor relationship and cutting costs in the lab.

Undergraduate Societal Roles

Oct 2014 – Jul 2016

Vice-President and Webmaster for UCL Neuroscience Society

Open Portfolio Committee member for UCL Women’s Network.


Academic Service

Contributions to peer review

Dec 2017 – present

Assisting the review of submitted manuscripts for Nature Neuroscience, Nature Communications, Journal of Neuroscience, PLOS Computational Biology, eNeuro, Behavioral Neuroscience.

Supervision of students

Oct 2016 – ongoing

Supervising and mentoring Aiste Viduolyte and Gina Gilpin for their PhD projects on cholinergic signalling during hallucinations, The Francis Crick Institute (2022-2024).


Supervising and mentoring Adam Tong for his MSci project focused on 1-photon imaging analysis pipelines to isolate single-cell activity from Miniscope recordings, UCL (2020-21).


Teaching Akanksha Jain molecular biology techniques for her internship in Dr Yoh Isogai's lab, Sainsbury Wellcome Centre (2016).

Postgraduate Teaching Assistant

Jul 2018 – Mar 2019

Postgraduate teaching assistant for undergraduate modules, including visual neuroscience, pharmacology, microbiology and molecular biology. 


Professional Skills

General

Experienced in research, project management, resource allocation, critical thinking, data management and analysis, fast-paced independent and collaborative working, rapid learning, creative problem-solving, attention to detail, planning, time management, improvisation, leadership, supervision, mentoring, academic and science writing, presentation of complex concepts to both experts and laypeople, networking, public speaking, teaching, lab management, high degree of literacy and numeracy.

'Wet' lab techniques

Experienced in aseptic surgical techniques (craniotomy, injection, implant), mouse behavioural training, handling, and dosing, calcium imaging (1-photon miniscope, fibre photometry), optogenetics, high-density electrophysiology, immunohistochemistry, confocal microscopy, molecular techniques for large-scale production and purification of proteins and subsequent analysis, including cell transformation and culture, RT-PCR, HPLC, and gel electrophoresis including Southern and Western blotting.

'Dry' lab techniques

Experienced in data processing and analysis in Matlab, human psychophysical task design in Matlab, computational reinforcement learning model implementation in Matlab, linear mixed modelling in Matlab, spikesorting using phy, basic image analysis in ImageJ, neuronal tracing and reconstruction from electron microscopy stacks in ImageJ, Knossos and ITK-SNAP, constructing scientific equipment (e.g. behavioural rigs, virtual reality, microscope, Miniscope, surgical tools, 3D printed parts).

Publications

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